Multispecific Antibodies

Bispecific & Multispecific Antibody Characterization

Multispecific and bispecific antibodies (MsAbs / bsAbs) combine two or more antigen-binding specificities within a single molecule, enabling advanced mechanisms such as T-cell engagement, dual checkpoint blockade or receptor clustering. The wide variety of formats (e.g. IgG-like, Fc-less, knob-into-hole, CrossMab, tandem scFv) makes evaluation and characterization of critical quality attributes (CQAs) particularly sensitive and complex. Correct chain pairing, stoichiometry, format integrity and balanced binding to all targets are essential for efficacy, safety and manufacturability, and require dedicated multispecific antibody characterization strategies.

At Biofidus, we offer a broad, state-of-the-art analytical platform for multispecific and bispecific antibodies to support innovator biologics development as well as biosimilar comparability studies.

We cover structural and functional characterization, including in-depth primary structure and sequence confirmation, amino acid and post-translational modifications, impurities such as homodimers or mispaired species, and target-relevant functionality in cell-based assays.

We are specialists in antibody glycosylation analysis, a key modification with strong impact on function, stability and immunogenicity of biopharmaceutical molecules. Our extensive experience allows us to guide you through the available methods and define the optimal, ICH-aligned analytical strategy for your MsAb / bsAb project.

 

Multispecific Antibody CQAs and Analytical Techniques

Critical Quality Attribute Biofidus Techniques Development Purpose
Chain pairing & format integrity Intact/subunit LC-MS, peptide mapping LC-MS/MS, CE-SDS, SEC Correct pairing, homodimers, mispaired species
Identity & primary structure Intact/subunit LC-MS, peptide mapping LC-MS/MS Identity, sequence, N- and C-terminus
Post-translational modifications Peptide mapping LC-MS/MS, intact/subunit LC-MS Oxidation, deamidation, isomerization, glycation, clipping
Glycosylation HILIC-FLD-MS, glycopeptide LC-MS/MS, HPAEC-PAD Glycan profile, occupancy, monosaccharides, sialic acids
Disulfide bonds & free thiols Non-reduced LC-MS/MS, free-thiol assay, non-reducing CE-SDS Disulfide pairing and scrambling, free cysteines
Higher-order structure CD, FTIR, intrinsic fluorescence Secondary/tertiary structure
Thermal stability DSC, nanoDSF, DLS Unfolding, Tm, aggregation onset
Size variants & aggregation SEC-UV/MALS, AUC, DLS Monomer, aggregates, molecular size
Fragments & purity Reducing/non-reducing CE-SDS, SEC-UV/MALS Fragments, clipping, purity
Particles Light obscuration, MFI, DLS Subvisible particles
Charge variants IEX (CEX and AEX), cIEF, CZE Acidic/basic variants
Hydrophobicity variants HIC, RP-HPLC Hydrophobic and hydrophilic variants
Product-related impurities SEC, CE-SDS, IEX/cIEF, LC-MS/MS Aggregates, fragments, modified forms
Process-related impurities HCP ELISA/LC-MS, qPCR, Protein A ELISA HCP, residual DNA, Protein A
Target binding SPR, ELISA, flow cytometry Affinity, kinetics, specificity, cellular binding
Fc-mediated binding SPR, ELISA FcγR, FcRn, C1q binding
Biological activity Cell-based assays including reporter gene assays, signal transduction, viability and cytotoxicity (e.g., ADC cytotoxicity) Potency, mechanism of action
Effector function ADCC (using reporter or primary cells as effector cells), CDC, ADCP Fc-mediated activity
Internalization Flow cytometry-based internalization analysis Internalization kinetics
Protein concentration UV A280, amino-acid analysis Concentration, extinction coefficient
Stability & degradation Forced degradation + stability-indicating methods Degradation pathways, shelf life
Comparability & biosimilarity Orthogonal structural and functional analytics Batch, process, reference comparison

We adapt our platform methods to the properties of your drug substance, its individual formulation matrix, and your specific analytical question, and qualify them as needed according to ICH guidelines.

Get in contact with us to quickly find the optimal setup for your analytical challenge and to speak directly from expert to expert.

Our Capabilities

  • Identity, primary structure and correct chain pairing
  • Impurities such as homodimers, mispaired antibodies and other product-related variants
  • Post-translational modifications
  • Glycosylation profile
  • Aggregation
  • Charge variants and isoforms
  • Higher-order structure
  • Target binding
  • Biological potency

Just what you need? Contact us!

FAQ

Find answers to frequently asked questions about our analytical services, methods, technologies, and studies, from molecular characterization and bioactivity to comparability, stability, and fit-for-purpose method development. 

Yes. We design binding studies (e.g., SPR and complementary formats) to evaluate target engagement for each specificity and to detect functional imbalances where relevant.

Yes. We tailor orthogonal CQA panels and functional assays to the multispecific format and intended use for innovator and comparability/biosimilarity questions.

 

We address identity and correct chain pairing and detect product-related impurities such as homodimers or mispaired species using orthogonal MS, chromatographic and electrophoretic methods.

Typical bsAb CQAs include format integrity/stoichiometry, charge and size heterogeneity, PTMs, glycosylation profile, aggregation and balanced binding to all targets, supported by integrated structural methods plus binding and potency assays.

We support a range of formats and adapt the analytical strategy to the architecture (e.g., IgG-like vs Fc-less) to ensure format integrity, purity and functional relevance are addressed.

Standalone and integral bioanalytical services

TECHNOLOGIES USED

  1. LC-ESI-MS/MS peptide mapping
  2. LC-ESI-MS intact mass analysis
  3. Reversed phase (RP) chromatography
  4. Size exclusion chromatography (SEC)
  5. Hydrophilic interaction chromatography (HILIC)
  6. Hydrophobic interaction chromatography (HIC)
  7. Ion exchange chromatography (IEX)
  8. High performance anion exchange chromatography with pulsed amperometric detection (HPAEC-PAD)
  9. Absolute protein quantification (AQUA)
  10. Capillary gel electrophoresis (CGE)
  11. Capillary isoelectric focusing (cIEF)
  12. Capillary zone electrophoresis (CZE)-UV
  13. (2D-)SDS-PAGE
  14. Gel based isoelectric focusing (IEF)
  15. Western blot​
  16. ELISA​
  17. Surface plasmon resonance (SPR) ​
  18. Cell-based assays​
  19. Plasma/serum stability assays​
  20. Nanopore DNA/RNA sequencing​
  21. qPCR​
  22. Analytical ultracentrifugation (AUC)​
  23. Circular dichroism (CD)
  24. Differential scanning calorimetry (DSC)
  25. Dynamic light scattering (DLS) ​
  26. Fourier transform infrared (FTIR) spectroscopy​

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Our Expert

Across end-to-end delivery, our experts remain on hand with deep scientific expertise whenever needed, providing oversight to streamline and de-risk milestone delivery.
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